Under HKLM:\Software\Microsoft\IntuneManagementExtension\Win32Apps\ there is a GUID that represents every user that has been evaluated on the machine, and under each user is the GUID for the application. Delete either the GUID for the app (Which can be easily determined as it is part of the URL when viewing the application in intune) or delete youe user GUID (or all if unsure) and then restart the management service.
All apps will re evaluate , and your install counters will be reset ?.